Method 1:
@input = (exon1, exon5, exon12, exon30, exon2);
my @sorted = sort { substr($a, 4) <=> substr($b, 4) } @input;
print "@sorted";
Method 2:
use strict;
use warnings;
use Data::Dumper;
my $fh = \*DATA;
my %lines;
while (my $line = <$fh>) {
chomp($line);
$lines{$_}++ for split /,/, $line;
}
my @sorted_array = sort keys %lines;
print Dumper \@sorted_array;
__DATA__
A2B12,A8B15
A3B27
A5B14,A8B15,A5B18
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